Agriculture is at the heart of the solution to achieve sustainability in feeding the world population, but advancing our understanding on how agricultural output responds to climatic variability is still needed. Precision Agriculture (PA), which is a management strategy that uses technology such as remote sensing, Geographical Information System (GIS), and machine learning for decision making in the field, has emerged as a promising approach to enhance crop production, increase yield, and reduce water and nutrient losses and environmental impacts. In this context, multiple models to predict agricultural phenotypes, such as crop yield, from genomics (G), environment (E), weather and soil, and field management practices (M) have been developed. These models have traditionally been based on mechanistic or statistical approaches. However, AI approaches are intrinsically well-suited to model complex interactions and have more recently been developed, outperforming classical methods. Here, we present a Natural Language Processing (NLP)-based neural network architecture to process the G, E and M inputs and their interactions. We show that by modeling DNA as natural language, our approach performs better than previous approaches when tested for new environments and similarly to other approaches for unseen seed varieties.
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Measuring and monitoring soil organic carbon is critical for agricultural productivity and for addressing critical environmental problems. Soil organic carbon not only enriches nutrition in soil, but also has a gamut of co-benefits such as improving water storage and limiting physical erosion. Despite a litany of work in soil organic carbon estimation, current approaches do not generalize well across soil conditions and management practices. We empirically show that explicit modeling of cause-and-effect relationships among the soil processes improves the out-of-distribution generalizability of prediction models. We provide a comparative analysis of soil organic carbon estimation models where the skeleton is estimated using causal discovery methods. Our framework provide an average improvement of 81% in test mean squared error and 52% in test mean absolute error.
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Embedding words in vector space is a fundamental first step in state-of-the-art natural language processing (NLP). Typical NLP solutions employ pre-defined vector representations to improve generalization by co-locating similar words in vector space. For instance, Word2Vec is a self-supervised predictive model that captures the context of words using a neural network. Similarly, GLoVe is a popular unsupervised model incorporating corpus-wide word co-occurrence statistics. Such word embedding has significantly boosted important NLP tasks, including sentiment analysis, document classification, and machine translation. However, the embeddings are dense floating-point vectors, making them expensive to compute and difficult to interpret. In this paper, we instead propose to represent the semantics of words with a few defining words that are related using propositional logic. To produce such logical embeddings, we introduce a Tsetlin Machine-based autoencoder that learns logical clauses self-supervised. The clauses consist of contextual words like "black," "cup," and "hot" to define other words like "coffee," thus being human-understandable. We evaluate our embedding approach on several intrinsic and extrinsic benchmarks, outperforming GLoVe on six classification tasks. Furthermore, we investigate the interpretability of our embedding using the logical representations acquired during training. We also visualize word clusters in vector space, demonstrating how our logical embedding co-locate similar words.
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Large training data and expensive model tweaking are standard features of deep learning for images. As a result, data owners often utilize cloud resources to develop large-scale complex models, which raises privacy concerns. Existing solutions are either too expensive to be practical or do not sufficiently protect the confidentiality of data and models. In this paper, we study and compare novel \emph{image disguising} mechanisms, DisguisedNets and InstaHide, aiming to achieve a better trade-off among the level of protection for outsourced DNN model training, the expenses, and the utility of data. DisguisedNets are novel combinations of image blocktization, block-level random permutation, and two block-level secure transformations: random multidimensional projection (RMT) and AES pixel-level encryption (AES). InstaHide is an image mixup and random pixel flipping technique \cite{huang20}. We have analyzed and evaluated them under a multi-level threat model. RMT provides a better security guarantee than InstaHide, under the Level-1 adversarial knowledge with well-preserved model quality. In contrast, AES provides a security guarantee under the Level-2 adversarial knowledge, but it may affect model quality more. The unique features of image disguising also help us to protect models from model-targeted attacks. We have done an extensive experimental evaluation to understand how these methods work in different settings for different datasets.
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Recent advances in deep learning have enabled us to address the curse of dimensionality (COD) by solving problems in higher dimensions. A subset of such approaches of addressing the COD has led us to solving high-dimensional PDEs. This has resulted in opening doors to solving a variety of real-world problems ranging from mathematical finance to stochastic control for industrial applications. Although feasible, these deep learning methods are still constrained by training time and memory. Tackling these shortcomings, Tensor Neural Networks (TNN) demonstrate that they can provide significant parameter savings while attaining the same accuracy as compared to the classical Dense Neural Network (DNN). In addition, we also show how TNN can be trained faster than DNN for the same accuracy. Besides TNN, we also introduce Tensor Network Initializer (TNN Init), a weight initialization scheme that leads to faster convergence with smaller variance for an equivalent parameter count as compared to a DNN. We benchmark TNN and TNN Init by applying them to solve the parabolic PDE associated with the Heston model, which is widely used in financial pricing theory.
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When testing conditions differ from those represented in training data, so-called out-of-distribution (OOD) inputs can mar the reliability of black-box learned components in the modern robot autonomy stack. Therefore, coping with OOD data is an important challenge on the path towards trustworthy learning-enabled open-world autonomy. In this paper, we aim to demystify the topic of OOD data and its associated challenges in the context of data-driven robotic systems, drawing connections to emerging paradigms in the ML community that study the effect of OOD data on learned models in isolation. We argue that as roboticists, we should reason about the overall system-level competence of a robot as it performs tasks in OOD conditions. We highlight key research questions around this system-level view of OOD problems to guide future research toward safe and reliable learning-enabled autonomy.
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Tsetlin Machine (TM) has been gaining popularity as an inherently interpretable machine leaning method that is able to achieve promising performance with low computational complexity on a variety of applications. The interpretability and the low computational complexity of the TM are inherited from the Boolean expressions for representing various sub-patterns. Although possessing favorable properties, TM has not been the go-to method for AI applications, mainly due to its conceptual and theoretical differences compared with perceptrons and neural networks, which are more widely known and well understood. In this paper, we provide detailed insights for the operational concept of the TM, and try to bridge the gap in the theoretical understanding between the perceptron and the TM. More specifically, we study the operational concept of the TM following the analytical structure of perceptrons, showing the resemblance between the perceptrons and the TM. Through the analysis, we indicated that the TM's weight update can be considered as a special case of the gradient weight update. We also perform an empirical analysis of TM by showing the flexibility in determining the clause length, visualization of decision boundaries and obtaining interpretable boolean expressions from TM. In addition, we also discuss the advantages of TM in terms of its structure and its ability to solve more complex problems.
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Migraine is a high-prevalence and disabling neurological disorder. However, information migraine management in real-world settings could be limited to traditional health information sources. In this paper, we (i) verify that there is substantial migraine-related chatter available on social media (Twitter and Reddit), self-reported by migraine sufferers; (ii) develop a platform-independent text classification system for automatically detecting self-reported migraine-related posts, and (iii) conduct analyses of the self-reported posts to assess the utility of social media for studying this problem. We manually annotated 5750 Twitter posts and 302 Reddit posts. Our system achieved an F1 score of 0.90 on Twitter and 0.93 on Reddit. Analysis of information posted by our 'migraine cohort' revealed the presence of a plethora of relevant information about migraine therapies and patient sentiments associated with them. Our study forms the foundation for conducting an in-depth analysis of migraine-related information using social media data.
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Spoken language understanding (SLU) tasks have been studied for many decades in the speech research community, but have not received as much attention as lower-level tasks like speech and speaker recognition. In particular, there are not nearly as many SLU task benchmarks, and many of the existing ones use data that is not freely available to all researchers. Recent work has begun to introduce such benchmark datasets for several tasks. In this work, we introduce several new annotated SLU benchmark tasks based on freely available speech data, which complement existing benchmarks and address gaps in the SLU evaluation landscape. We contribute four tasks: question answering and summarization involve inference over longer speech sequences; named entity localization addresses the speech-specific task of locating the targeted content in the signal; dialog act classification identifies the function of a given speech utterance. We follow the blueprint of the Spoken Language Understanding Evaluation (SLUE) benchmark suite. In order to facilitate the development of SLU models that leverage the success of pre-trained speech representations, we will be publishing for each task (i) annotations for a relatively small fine-tuning set, (ii) annotated development and test sets, and (iii) baseline models for easy reproducibility and comparisons. In this work, we present the details of data collection and annotation and the performance of the baseline models. We also perform sensitivity analysis of pipeline models' performance (speech recognizer + text model) to the speech recognition accuracy, using more than 20 state-of-the-art speech recognition models.
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Recommendation Systems (RSs) are ubiquitous in modern society and are one of the largest points of interaction between humans and AI. Modern RSs are often implemented using deep learning models, which are infamously difficult to interpret. This problem is particularly exasperated in the context of recommendation scenarios, as it erodes the user's trust in the RS. In contrast, the newly introduced Tsetlin Machines (TM) possess some valuable properties due to their inherent interpretability. TMs are still fairly young as a technology. As no RS has been developed for TMs before, it has become necessary to perform some preliminary research regarding the practicality of such a system. In this paper, we develop the first RS based on TMs to evaluate its practicality in this application domain. This paper compares the viability of TMs with other machine learning models prevalent in the field of RS. We train and investigate the performance of the TM compared with a vanilla feed-forward deep learning model. These comparisons are based on model performance, interpretability/explainability, and scalability. Further, we provide some benchmark performance comparisons to similar machine learning solutions relevant to RSs.
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